STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104934693Unconventional myosin-XVIIIa isoform X1. (2426 aa)    
Predicted Functional Partners:
LOC104929822
Myosin light chain 1, skeletal muscle isoform.
   
 0.773
LOC104932644
Myosin light polypeptide 6 isoform X2.
   
 0.587
LOC104931969
Myosin light polypeptide 6.
   
 0.587
LOC104922583
Myosin regulatory light chain 2, smooth muscle minor isoform.
   
 0.526
LOC104936390
Myosin regulatory light polypeptide 9.
   
 0.526
myl7
Myosin regulatory light chain 2, atrial isoform.
   
 0.526
LOC104925296
Myosin regulatory light chain 2, smooth muscle minor isoform.
   
 0.526
chrac1
Chromatin accessibility complex protein 1.
    
 
 0.521
LOC104926897
Myosin regulatory light chain 2, skeletal muscle isoform.
   
 0.473
mylpf
Myosin regulatory light chain 2, skeletal muscle isoform.
   
 0.473
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.