STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104920178Hexokinase-1. (983 aa)    
Predicted Functional Partners:
LOC104920758
Glucose-6-phosphate isomerase.
 
 
 
 0.965
GPI
Glucose-6-phosphate isomerase.
 
 
 
 0.965
LOC104939243
Glucose-6-phosphatase.
   
 
 0.952
g6pc
Glucose-6-phosphatase.
   
 
 0.951
h6pd
GDH/6PGL endoplasmic bifunctional protein.
   
 
 0.951
pfkl
ATP-dependent 6-phosphofructokinase, liver type.
   
 
 0.949
mpi
Mannose-6-phosphate isomerase.
    
 0.944
g6pc3
Glucose-6-phosphatase 3.
   
 
 0.943
pgm2
Phosphoglucomutase / phosphopentomutase.
   
 
 0.942
LOC104927428
Phosphoglucomutase-1-like.
   
 
 0.942
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.