STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9ZUQ0Alkyl transferase; Belongs to the UPP synthase family. (267 aa)    
Predicted Functional Partners:
A0A4P9ZX70
Uncharacterized protein.
   
 0.998
A0A4P9ZY55
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.896
A0A4Q0A381
Uncharacterized protein.
     
 0.864
A0A4P9ZQ75
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
 0.863
A0A4P9ZZX0
Isoprenoid synthase domain-containing protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.851
A0A4V1J4Z9
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.849
A0A4P9ZRD9
Isopentenyl-diphosphate delta-isomerase.
  
 
 0.817
A0A4P9ZUC8
4-hydroxybenzoate polyprenyl transferase.
    
 0.810
A0A4P9ZW37
Farnesyl-diphosphate farnesyltransferase.
     
 0.807
A0A4P9ZWZ5
acidPPc domain-containing protein.
    
 0.791
Your Current Organism:
Dimargaris cristalligena
NCBI taxonomy Id: 215637
Other names: D. cristalligena
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