STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAL0058annotation not available (470 aa)    
Predicted Functional Partners:
eutC
annotation not available
 
   
 0.841
eutB
annotation not available
 
   
 0.829
BCAL0057
annotation not available
       0.475
BCAS0272
Urea amidolyase, urea carboxylase subunit; Similar to the C-terminal region of Saccharomyces cerevisiae (baker's yeast) Urea amidolyase Dur1,2 UniProt:P32528 (EMBL:M64926 (1835 aa) fasta scores: E()=2.4e-147, 44.399% id in 1214 aa
 
  
 0.469
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 216591
Other names: B. cenocepacia J2315, Burkholderia cenocepacia, Burkholderia cenocepacia J2315, Burkholderia cenocepacia str. J2315, Burkholderia cepacia J2315, Burkholderia cepacia str. J2315
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