STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAL2400annotation not available (188 aa)    
Predicted Functional Partners:
BCAL2398
annotation not available
 
     0.906
BCAL2399
annotation not available
 
    0.793
BCAM0064
annotation not available
  
     0.767
BCAL2640
annotation not available
  
     0.762
BCAM1363
annotation not available
  
     0.756
BCAM2287
annotation not available
  
     0.756
bceH
annotation not available
  
     0.731
BCAM2721
annotation not available
  
     0.725
BCAL0510
annotation not available
  
     0.720
BCAL1490
annotation not available
  
     0.719
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 216591
Other names: B. cenocepacia J2315, Burkholderia cenocepacia, Burkholderia cenocepacia J2315, Burkholderia cenocepacia str. J2315, Burkholderia cepacia J2315, Burkholderia cepacia str. J2315
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