node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MMAR_0828 | rplB | MMAR_0828 | MMAR_1034 | Conserved hypothetical protein. | 50S ribosomal protein L2, RplB; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.999 |
MMAR_0828 | rplC | MMAR_0828 | MMAR_1031 | Conserved hypothetical protein. | 50S ribosomal protein L3 RplC; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |
MMAR_0828 | rplD | MMAR_0828 | MMAR_1032 | Conserved hypothetical protein. | 50S ribosomal protein L4, RplD; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.999 |
MMAR_0828 | rplI | MMAR_0828 | MMAR_0075 | Conserved hypothetical protein. | 50S ribosomal protein L9 RplI; Binds to the 23S rRNA. | 0.999 |
MMAR_0828 | rplP | MMAR_0828 | MMAR_1038 | Conserved hypothetical protein. | 50S ribosomal protein L16, RplP; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.999 |
MMAR_0828 | rplW | MMAR_0828 | MMAR_1033 | Conserved hypothetical protein. | 50S ribosomal protein L23, RplW; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
MMAR_0828 | rpsF | MMAR_0828 | MMAR_0072 | Conserved hypothetical protein. | 30S ribosomal protein S6 RpsF; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
MMAR_0828 | rpsG | MMAR_0828 | MMAR_1012 | Conserved hypothetical protein. | 30S ribosomal protein S7, RpsG; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
MMAR_0828 | rpsJ | MMAR_0828 | MMAR_1030 | Conserved hypothetical protein. | 30S ribosomal protein S10, RpsJ; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
MMAR_0828 | rpsL | MMAR_0828 | MMAR_1011 | Conserved hypothetical protein. | 30S ribosomal protein S12, RpsL; With S4 and S5 plays an important role in translational accuracy. | 0.999 |
rplB | MMAR_0828 | MMAR_1034 | MMAR_0828 | 50S ribosomal protein L2, RplB; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Conserved hypothetical protein. | 0.999 |
rplB | rplC | MMAR_1034 | MMAR_1031 | 50S ribosomal protein L2, RplB; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 50S ribosomal protein L3 RplC; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |
rplB | rplD | MMAR_1034 | MMAR_1032 | 50S ribosomal protein L2, RplB; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 50S ribosomal protein L4, RplD; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.999 |
rplB | rplI | MMAR_1034 | MMAR_0075 | 50S ribosomal protein L2, RplB; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 50S ribosomal protein L9 RplI; Binds to the 23S rRNA. | 0.998 |
rplB | rplP | MMAR_1034 | MMAR_1038 | 50S ribosomal protein L2, RplB; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 50S ribosomal protein L16, RplP; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.999 |
rplB | rplW | MMAR_1034 | MMAR_1033 | 50S ribosomal protein L2, RplB; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 50S ribosomal protein L23, RplW; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
rplB | rpsF | MMAR_1034 | MMAR_0072 | 50S ribosomal protein L2, RplB; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 30S ribosomal protein S6 RpsF; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
rplB | rpsG | MMAR_1034 | MMAR_1012 | 50S ribosomal protein L2, RplB; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 30S ribosomal protein S7, RpsG; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
rplB | rpsJ | MMAR_1034 | MMAR_1030 | 50S ribosomal protein L2, RplB; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 30S ribosomal protein S10, RpsJ; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
rplB | rpsL | MMAR_1034 | MMAR_1011 | 50S ribosomal protein L2, RplB; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 30S ribosomal protein S12, RpsL; With S4 and S5 plays an important role in translational accuracy. | 0.999 |