STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyp150A6Cytochrome P450 are a group of heme-thiolate monooxygenases. they oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics. (424 aa)    
Predicted Functional Partners:
MMAR_3176
Non-ribosomal peptide synthetase; Production of unknown peptide. contains 5 predicted modules of domain organiszation:Amt, CAMT, cat, cat, CAMT int te. the 'A' domain substrates have not been accurately predicted but probably Phe, Thr or ala).
  
 0.977
MMAR_0099
Non-ribosomal peptide synthetase; Function unknown but the gene encodes a Nrp of three functional domains with the predicted sequential condensation of the amino acids threonine, threonine and alanine. the second domain contains an epimerization domain and the third domains contains a terminal te.
  
 0.857
MMAR_3097
Non-ribosomal peptide synthetase; Nrp of 5 modules. domain structure (C, a, T) X 5, ending in a te domain. metabolite produced unknown.
  
 0.857
MMAR_1876
Long-chain acyl-CoA synthetase; Lipid metabolism.
  
 0.855
pks13
Polyketide synthase Pks13; The enzyme responsible for the final condensation step in mycolic acid biosynthesis, bringing the short and long (mero) chains together.
  
 0.773
MMAR_1180
N-term fused in-frame with fatty acyl-AMP ligase FadD28_1; Synthesis of unknown polyketide.
  
 0.754
MMAR_3099
Polyketide synthase and peptide synthetase; Production of unknown metabolite. this CDS encodes a single NRP and PKS module with domain structure: (KS, Ata, DH, ER, KR, ACP).
  
 0.754
MMAR_4693
Involved in transcriptional mechanism.
 
     0.747
MMAR_0101
Polyketide synthase PKS; Function unknown but contains a single extension module with domain structure (KS, Ata, DH, KR, ACP).
  
 0.745
MMAR_3155
Ferredoxin; Involved in electron transfer and energy coupling reactions. probably part of an operon including the P450 and ferrodoxin reductase gene products.
 
 0.713
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.