STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
espBEsx-1 secreted protein, EspB; Required for intracellular persistence. (454 aa)    
Predicted Functional Partners:
MMAR_5456
Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
  
  
 0.984
MMAR_1331
Conserved hypothetical alanine and proline rich protein.
  
 
 0.973
MMAR_4351
Conserved hypothetical alanine and proline rich protein.
  
 
 0.973
mycP3_1
Membrane-anchored serine protease (mycosin), MycP3_1; Thought to have proteolytic activity.
  
  
 0.898
espA
ESX-1 secretion-associated protein A, EspA.
  
 
 0.878
MMAR_5439
Conserved hypothetical transmembrane protein.
  
 
 0.848
MMAR_5458
Conserved hypothetical membrane protein.
     
 0.829
MMAR_4167
Conserved hypothetical protein.
      
 0.827
esxB_1
A culture filtrate antigen that forms part of a novel secretion apparatus; Belongs to the WXG100 family.
  
  
 0.801
esxB
Esat-6 like protein EsxB; Function unknown; a component of a novel secretion apparatus. (10 kDa culture filtrate antigen cfp10).
  
  
 0.801
Your Current Organism:
Mycobacterium marinum
NCBI taxonomy Id: 216594
Other names: M. marinum M, Mycobacterium marinum M, Mycobacterium marinum str. M, Mycobacterium marinum strain M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.