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trmE protein (Rhizobium leguminosarum 3841) - STRING interaction network
"trmE" - tRNA modification GTPase MnmE in Rhizobium leguminosarum 3841
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Predicted Interactions
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trmEtRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. TrmE GTPase family (439 aa)    
Predicted Functional Partners:
gidA2
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family (625 aa)
 
  0.999
gidB
Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA (205 aa)
   
  0.997
mnmA
tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 (408 aa)
 
 
  0.915
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs; Belongs to the RNA methyltransferase TrmD family (244 aa)
   
   
  0.901
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (359 aa)
 
   
  0.830
trpS
annotation not available (354 aa)
   
   
  0.823
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (129 aa)
   
   
  0.811
rluD
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (341 aa)
 
   
  0.804
lepA
Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (610 aa)
 
   
  0.785
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho’s RNA-dependent ATPase activity, and release of the mRNA from the DNA template (421 aa)
   
   
  0.769
Your Current Organism:
Rhizobium leguminosarum 3841
NCBI taxonomy Id: 216596
Other names: R. leguminosarum bv. viciae 3841, Rhizobium leguminosarum 3841, Rhizobium leguminosarum bv. viciae 3841, Rhizobium leguminosarum bv. viciae str. 3841, Rhizobium leguminosarum viciae 3841
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