STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yadEConserved hypothetical protein. (403 aa)    
Predicted Functional Partners:
yadI
Putative PTS system IIA component.
 
     0.796
bscA
Cellulose biosynthesis protein catalytic subunit A; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
  
  
 0.624
yadG
Hypothetical ABC transporter ATP-binding protein.
     
 0.520
yadH
ABC transporter integral membrane protein.
     
 0.504
SBG_0793
Putative oxidoreductase.
 
  
 0.503
ycdZ
Putative membrane protein.
  
     0.472
nanT
Putative sialic acid transporter.
  
     0.470
yhbE
Putative membrane protein.
  
     0.441
chiA_2
Putative chitinase.
 
   
 0.422
arnA_1
Putative lipopolysaccharide modification protein.
  
  
 0.416
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.