STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fepEFerric enterobactin transport protein. (378 aa)    
Predicted Functional Partners:
SBG_1714
Conserved hypothetical protein.
  
     0.774
napD
Putative napAB assembly protein.
  
     0.724
yccT
Putative secreted protein; Belongs to the UPF0319 family.
  
     0.715
wapA_1
Rhs protein (fragment).
  
     0.703
adiY
Putative AraC family regulatory protein.
  
     0.692
yhjV
Putative trans-sulfuration enzyme (pseudogene).
  
     0.691
SBOV46981
Conserved hypothetical protein.
  
     0.679
yggD
Putative transcriptional regulatory protein.
  
     0.678
ppdB
Prepilin peptidase dependent protein B precursor.
  
     0.677
marT
Conserved hypothetical protein.
  
     0.675
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.