STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmsB_5Molybdopterin-containing oxidoreductase iron-sulfur subunit. (185 aa)    
Predicted Functional Partners:
dmsA_8
Molybdopterin-containing oxidoreductase catalytic subunit.
 
   0.910
dmsD_2
Conserved hypothetical protein.
 
  
 0.873
SBG_0521
Molybdopterin-containing oxidoreductase membrane anchor subunit.
 
    0.840
hybB
Putative hydrogenase-2 cytochrome b subunit.
  
 
 0.600
fdoI
Formate dehydrogenase-O gamma subunit.
 
 
 0.598
phsA
Thiosulfate reductase precursor.
  
   0.592
fdnI
Formate dehydrogenase, nitrate-inducible,cytochrome b556.
 
 
 0.591
porB
Putative pyruvate-flavodoxin oxidoreductase.
  
  
 0.583
fdoG
Formate dehydrogenase-O, major subunit; Carries a UGA stop codon which is readthrough as an opal codon by the selenocysteine tRNA.
 
 
 0.580
ttrA
Tetrathionate reductase subunit A.
  
   0.549
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.