STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltJGlutamate/aspartate transport system permease protein GltJ. (246 aa)    
Predicted Functional Partners:
gltL
Glutamate/aspartate transport ATP-binding protein GltL.
 
 0.998
gltK
Glutamate/aspartate transport system permease protein GltK.
 
 
0.996
ybeJ
ABC transporter periplasmic binding protein (glutamate/aspartate?).
 
 0.995
glnH
Glutamine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family.
 
 0.883
artM_1
Putative ABC-transport ATP-binding protein.
 
 
 0.869
glnQ
Glutamine transport ATP-binding protein GlnQ.
 
 
 0.866
artJ
Arginine-binding periplasmic protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family.
 
 0.847
artI
Arginine-binding periplasmic protein 1 precursor; Belongs to the bacterial solute-binding protein 3 family.
 
 0.843
fliY
Cystine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family.
 
 0.842
hisJ
Histidine-binding periplasmic protein.
 
 0.785
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.