STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yleBPutative monooxygenase. (391 aa)    
Predicted Functional Partners:
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
 
 
 0.988
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE.
  
 
 0.967
ubiA
4-hydroxybenzoate octaprenyl transferase; Belongs to the UbiA prenyltransferase family.
  
   
 0.791
miaB
MiaB protein (putative tRNA-thiotransferase (or tRNA-methylthiotransferase)).
  
  
 0.569
ydhD
Conserved hypothetical protein; Belongs to the glutaredoxin family. Monothiol subfamily.
  
     0.564
hemF
Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
  
  
 0.555
aarF
Ubiquinone biosynthesis protein.
 
 
 0.538
ybeY
Conserved hypothetical protein.
 
     0.515
sucB
Dihydrolipoamide succinyltransferase component (E2).
    
 
 0.487
STY2873
Conserved hypothetical protein.
  
   
 0.484
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.