Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| gcp_1 | lolD_1 | SBG_2802 | SBG_1056 | Putative glycoprotease. | ABC transporter ATP-binding subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.661 |
| gcp_1 | pheS | SBG_2802 | SBG_1189 | Putative glycoprotease. | phenylalanyl-tRNA synthetase alpha chain. | 0.680 |
| gcp_1 | rpsE | SBG_2802 | SBG_3032 | Putative glycoprotease. | 30S ribosomal subunit protein S5. | 0.587 |
| gcp_1 | rpsK | SBG_2802 | SBG_3027 | Putative glycoprotease. | 30S ribosomal subunit protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.550 |
| gcp_1 | trxB | SBG_2802 | SBG_0814 | Putative glycoprotease. | Thioredoxin reductase. | 0.457 |
| lolA | lolC_3 | SBG_0817 | SBG_1055 | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter integral membrane subunit. | 0.945 |
| lolA | lolD_1 | SBG_0817 | SBG_1056 | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter ATP-binding subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.909 |
| lolA | lolE | SBG_0817 | SBG_1057 | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter integral membrane subunit. | 0.950 |
| lolA | ybjZ | SBG_0817 | SBG_0803 | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Conserved hypothetical ABC transporter; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.771 |
| lolC_3 | lolA | SBG_1055 | SBG_0817 | ABC transporter integral membrane subunit. | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.945 |
| lolC_3 | lolD_1 | SBG_1055 | SBG_1056 | ABC transporter integral membrane subunit. | ABC transporter ATP-binding subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.998 |
| lolC_3 | lolE | SBG_1055 | SBG_1057 | ABC transporter integral membrane subunit. | ABC transporter integral membrane subunit. | 0.998 |
| lolC_3 | nagK_2 | SBG_1055 | SBG_1058 | ABC transporter integral membrane subunit. | Putative ROK-family protein. | 0.694 |
| lolC_3 | ybjZ | SBG_1055 | SBG_0803 | ABC transporter integral membrane subunit. | Conserved hypothetical ABC transporter; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.906 |
| lolD_1 | gcp_1 | SBG_1056 | SBG_2802 | ABC transporter ATP-binding subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | Putative glycoprotease. | 0.661 |
| lolD_1 | lolA | SBG_1056 | SBG_0817 | ABC transporter ATP-binding subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.909 |
| lolD_1 | lolC_3 | SBG_1056 | SBG_1055 | ABC transporter ATP-binding subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | ABC transporter integral membrane subunit. | 0.998 |
| lolD_1 | lolE | SBG_1056 | SBG_1057 | ABC transporter ATP-binding subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | ABC transporter integral membrane subunit. | 0.997 |
| lolD_1 | nagK_2 | SBG_1056 | SBG_1058 | ABC transporter ATP-binding subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | Putative ROK-family protein. | 0.700 |
| lolD_1 | pheS | SBG_1056 | SBG_1189 | ABC transporter ATP-binding subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | phenylalanyl-tRNA synthetase alpha chain. | 0.566 |
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