STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slyATranscriptional regulator; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family. (144 aa)    
Predicted Functional Partners:
SBG_1424
Putative membrane protein.
      
 0.830
marR
Multiple antibiotic resistance protein MarR.
  
   
 0.810
phoP
Transcriptional regulatory protein PhoP,regulator of virulence determinants.
   
  
 0.756
phoQ
Sensor protein PhoQ, regulator of virulence determinants.
      
 0.748
ompR
Two-component response regulator OmpR.
      
 0.729
SBG_1267
Conserved hypothetical protein.
  
  
 0.694
pagC
Outer membrane invasion protein.
   
  
 0.621
ydhJ
Putative HlyD-family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.620
envZ
Two-component sensor kinase EnvZ.
  
  
 0.580
himA
Integration host factor alpha-subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
   
    0.578
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.