STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
marAMultiple antibiotic resistance protein MarA. (144 aa)    
Predicted Functional Partners:
marR
Multiple antibiotic resistance protein MarR.
  
  
 0.995
acrR
Potential acrAB operon repressor.
  
   
 0.918
araC
Arabinose operon regulatory protein.
  
   
 0.914
acrA
Acriflavin resistance protein A precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
      
 0.892
tolC
Outer membrane protein TolC precursor.
      
 0.890
acrB
Acriflavin resistance protein B.
    
 
 0.814
ompF
Outer membrane protein F precursor.
      
 0.811
soxR
SoxR protein.
      
 0.808
acrF
Acriflavin resistance protein F.
    
 
 0.806
acrD
Putative efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
    
 
 0.791
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.