Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroC | aroQ | SBG_2163 | SBG_1113 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Putative chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. | 0.958 |
| aroC | menF | SBG_2163 | SBG_2098 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Isochorismate synthase. | 0.912 |
| aroC | pabA | SBG_2163 | SBG_3077 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Para-aminobenzoate synthase, glutamine amidotransferase component II. | 0.942 |
| aroC | pheA | SBG_2163 | SBG_2382 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Chorismate mutase-P/prephenate dehydratase. | 0.984 |
| aroC | trpA | SBG_2163 | SBG_1589 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.839 |
| aroC | trpB | SBG_2163 | SBG_1588 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.721 |
| aroC | trpC | SBG_2163 | SBG_1587 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.808 |
| aroC | trpD | SBG_2163 | SBG_1586 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate synthase component II; anthranilate phosphoribosyltransferase. | 0.985 |
| aroC | trpE | SBG_2163 | SBG_1585 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate synthase component I. | 0.967 |
| aroC | tyrA | SBG_2163 | SBG_2384 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Chorismate mutase/prephenate dehydrogenase. | 0.996 |
| aroQ | aroC | SBG_1113 | SBG_2163 | Putative chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.958 |
| aroQ | menF | SBG_1113 | SBG_2098 | Putative chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. | Isochorismate synthase. | 0.848 |
| aroQ | pabA | SBG_1113 | SBG_3077 | Putative chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. | Para-aminobenzoate synthase, glutamine amidotransferase component II. | 0.820 |
| aroQ | pheA | SBG_1113 | SBG_2382 | Putative chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. | Chorismate mutase-P/prephenate dehydratase. | 0.915 |
| aroQ | trpC | SBG_1113 | SBG_1587 | Putative chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.475 |
| aroQ | trpD | SBG_1113 | SBG_1586 | Putative chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. | Anthranilate synthase component II; anthranilate phosphoribosyltransferase. | 0.940 |
| aroQ | trpE | SBG_1113 | SBG_1585 | Putative chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. | Anthranilate synthase component I. | 0.911 |
| aroQ | tyrA | SBG_1113 | SBG_2384 | Putative chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. | Chorismate mutase/prephenate dehydrogenase. | 0.932 |
| menF | aroC | SBG_2098 | SBG_2163 | Isochorismate synthase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.912 |
| menF | aroQ | SBG_2098 | SBG_1113 | Isochorismate synthase. | Putative chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. | 0.848 |
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