STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alsEPutative D-allulose-6-phosphate 3-epimerase. (225 aa)    
Predicted Functional Partners:
manA
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
 
  
 0.924
fbp
Fructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family.
  
 
 0.916
srlD
Sorbitol-6-phosphate 2-dehydrogenase (glucitol-6-phosphate dehydrogenase); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.912
pfkA
6-phosphofructokinase.
     
 0.911
yggF
Putative fructose-1,6-bisphosphatase.
    
 0.910
glpX
Putative glycerol metabolic protein.
    
 0.910
pfkB
6-phosphofructokinase isozyme; Belongs to the carbohydrate kinase PfkB family.
     
 0.907
yajF
Hypothetical ROK-family protein.
  
 
 0.905
mtlD
Mannitol-1-phosphate dehydrogenase.
     
 0.901
tktA_7
Putative transketolase N-terminal section.
   
 0.793
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.