STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
napBCytochrome c-type protein NapB precursor; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. (149 aa)    
Predicted Functional Partners:
napC
Cytochrome c-type protein NapC.
 
  
 0.999
napA
Putative nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.999
napD
Putative napAB assembly protein.
 
  
 0.996
napH
Ferredoxin-type protein NapH.
 
  
 0.995
napG
Ferredoxin-type protein NapG.
 
  
 0.995
torC2
Cytochrome c-type protein; Also significantly similar to SBG3384 49% identity in 366 aa overlap.
 
  
 0.923
napF
Ferredoxin-type protein NapF.
 
  
 0.923
torC
Cytochrome c-type protein; Also significantly similar to SBG2025 49% identity in 366 aa overlap.
 
  
 0.923
nirD
Nitrite reductase (NAD(P)H) small subunit.
   
 
 0.917
nirB
Nitrite reductase large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.914
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.