STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfcZConserved hypothetical protein. (94 aa)    
Predicted Functional Partners:
SBG_2998
Conserved hypothetical protein.
  
     0.772
SBOV06791
Putative lipoprotein.
  
     0.726
wzzE
Lipopolysaccharide biosynthesis protein; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
  
     0.719
smp
Putative membrane protein.
  
     0.694
yciS
Conserved hypothetical protein.
  
     0.693
STY1080_1
Conserved hypothetical protein.
  
     0.690
yafA
Conserved hypothetical protein; Belongs to the UPF0255 family.
  
     0.689
yihD
Conserved hypothetical protein.
  
     0.681
yciN
Conserved hypothetical protein.
  
     0.676
yecM_1
Conserved hypothetical protein.
  
     0.665
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.