STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrdINrdI protein. (136 aa)    
Predicted Functional Partners:
nrdH
Conserved hypothetical protein (pseudogene); This CDS is an orthologue of STY2928 and has been subject to a deletion event and a frameshift mutation.
 
  
 0.999
nrdF
Ribonucleoside-diphosphate reductase 2 beta chain.
 
 
 0.999
nrdE
Ribonucleoside-diphosphate reductase 2 alpha chain.
 
  
 0.997
nrdB
Ribonucleoside-diphosphate reductase 1 beta chain.
  
 
 0.981
nrdA
Ribonucleoside-diphosphate reductase 1 alpha chain.
  
  
 0.938
nrdD
Anaerobic ribonucleoside-triphosphate reductase.
     
 0.838
yfaE
Putative ferredoxin.
      
 0.833
grxA
Glutaredoxin 1.
  
  
 0.620
grxC
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
  
  
 0.620
entF
Enterobactin synthetase component F.
   
    0.533
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.