STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hycIHydrogenase 3 maturation protease. (151 aa)    
Predicted Functional Partners:
hycE
Formate hydrogenlyase subunit 5.
 
  
 0.994
hycF
Formate hydrogenlyase subunit 6.
 
  
 0.993
hycD
Formate hydrogenlyase subunit 4.
 
  
 0.990
hycB
Formate hydrogenlyase subunit 2.
 
  
 0.982
hycG
Formate hydrogenlyase subunit 7.
 
  
 0.980
hycH
Formate hydrogenlyase maturation protein.
 
  
 0.979
hycC
Formate hydrogenlyase subunit 3.
 
  
 0.951
hybD
Hydrogenase-2 component protein.
      
 0.832
hypE
Hydrogenase isoenzymes formation protein HypE.
 
   
 0.751
hypf
Hydrogenase maturation protein; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.
 
   
 0.699
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.