Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| arcB | fhlA | SBG_2958 | SBG_2480 | Aerobic respiration control sensor protein. | Transcriptional activator of the formate hydrogenlyase system. | 0.513 |
| arcB | hfQ | SBG_2958 | SBG_3805 | Aerobic respiration control sensor protein. | Host factor-I protein(HF-I); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.633 |
| arcB | rpoN | SBG_2958 | SBG_2947 | Aerobic respiration control sensor protein. | RNA polymerase sigma-54 factor (sigma-N). | 0.695 |
| arcB | rpoS | SBG_2958 | SBG_2538 | Aerobic respiration control sensor protein. | RNA polymerase sigma subunit RpoS (sigma-38); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.485 |
| arcB | ttrS | SBG_2958 | SBG_1225 | Aerobic respiration control sensor protein. | TtrS protein. | 0.970 |
| arcB | yegE | SBG_2958 | SBG_1942 | Aerobic respiration control sensor protein. | Putative membrane protein. | 0.997 |
| fhlA | arcB | SBG_2480 | SBG_2958 | Transcriptional activator of the formate hydrogenlyase system. | Aerobic respiration control sensor protein. | 0.513 |
| fhlA | hfQ | SBG_2480 | SBG_3805 | Transcriptional activator of the formate hydrogenlyase system. | Host factor-I protein(HF-I); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.485 |
| fhlA | hypB | SBG_2480 | SBG_2476 | Transcriptional activator of the formate hydrogenlyase system. | Hydrogenase isoenzymes formation protein HypB. | 0.517 |
| fhlA | hypC | SBG_2480 | SBG_2477 | Transcriptional activator of the formate hydrogenlyase system. | Hydrogenase isoenzymes formation protein HypC. | 0.508 |
| fhlA | hypD | SBG_2480 | SBG_2478 | Transcriptional activator of the formate hydrogenlyase system. | Hydrogenase isoenzymes formation protein HypD; Belongs to the HypD family. | 0.518 |
| fhlA | hypE | SBG_2480 | SBG_2479 | Transcriptional activator of the formate hydrogenlyase system. | Hydrogenase isoenzymes formation protein HypE. | 0.655 |
| fhlA | rpoN | SBG_2480 | SBG_2947 | Transcriptional activator of the formate hydrogenlyase system. | RNA polymerase sigma-54 factor (sigma-N). | 0.800 |
| fhlA | rpoS | SBG_2480 | SBG_2538 | Transcriptional activator of the formate hydrogenlyase system. | RNA polymerase sigma subunit RpoS (sigma-38); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.461 |
| fhlA | ttrS | SBG_2480 | SBG_1225 | Transcriptional activator of the formate hydrogenlyase system. | TtrS protein. | 0.507 |
| fhlA | yegE | SBG_2480 | SBG_1942 | Transcriptional activator of the formate hydrogenlyase system. | Putative membrane protein. | 0.449 |
| hfQ | arcB | SBG_3805 | SBG_2958 | Host factor-I protein(HF-I); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Aerobic respiration control sensor protein. | 0.633 |
| hfQ | fhlA | SBG_3805 | SBG_2480 | Host factor-I protein(HF-I); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Transcriptional activator of the formate hydrogenlyase system. | 0.485 |
| hfQ | rpoN | SBG_3805 | SBG_2947 | Host factor-I protein(HF-I); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | RNA polymerase sigma-54 factor (sigma-N). | 0.594 |
| hfQ | rpoS | SBG_3805 | SBG_2538 | Host factor-I protein(HF-I); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | RNA polymerase sigma subunit RpoS (sigma-38); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.896 |
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