STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBOV32171Conserved hypothetical protein. (95 aa)    
Predicted Functional Partners:
yeiO
Sugar efflux transporter.
      
 0.617
trg_1
Methyl-accepting chemotaxis protein.
  
    0.569
hybF
Hydrogenase-2 component protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
       0.473
hybE
Hydrogenase-2 component protein.
       0.473
hybD
Hydrogenase-2 component protein.
       0.473
hybC
Hydrogenase-2 large subunit.
       0.473
hybB
Putative hydrogenase-2 cytochrome b subunit.
       0.473
hybA
Hydrogenase-2 small subunit.
       0.473
hyb0
Hydrogenase-2 small chain protein.
       0.473
hybG
Putative ABC-transport protein,periplasmic-binding component (pseudogene); Hydrogenase-2 biosynthetic operon.
       0.421
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.