STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhhPConserved hypothetical protein; Belongs to the sulfur carrier protein TusA family. (81 aa)    
Predicted Functional Partners:
iscS_1
Putative L-cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
   
 0.998
yheN
Conserved hypothetical protein.
 
 
 0.996
tusE
Hypothetical protein in helD-serT intergenic region; Part of a sulfur-relay system.
  
   
 0.905
thiI_2
Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
  
  
 0.891
trmU
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase.
     
 0.842
moaD
Molybdopterin converting factor, subunit 1.
 
 
 
 0.840
moeB
Molybdopterin biosynthesis MoeB protein.
     
 0.835
intR
Putative lambdoid prophage rac integrase(fragment).
      
 0.829
miaB
MiaB protein (putative tRNA-thiotransferase (or tRNA-methylthiotransferase)).
   
 
 0.651
yheM
Conserved hypothetical protein.
 
   
 0.639
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.