STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtlRMannitol operon repressor (mannitol repressor protein). (196 aa)    
Predicted Functional Partners:
mtlD
Mannitol-1-phosphate dehydrogenase.
 
  
 0.961
mtlA
Mannitol-specific enzyme II of phosphotransferase system.
 
   
 0.746
malM
Maltose operon periplasmic protein.
  
     0.733
lamB
Maltoporin precursor; Involved in the transport of maltose and maltodextrins. Belongs to the porin LamB (TC 1.B.3) family.
  
     0.708
flgN
Flagella synthesis protein FlgN.
  
     0.706
yhjS
Conserved hypothetical protein.
  
     0.706
ptsH
Phosphocarrier protein HPr.
    
   0.670
SBG_3168
Putative membrane protein.
  
     0.644
yibL
Conserved hypothetical protein.
 
     0.641
SBOV10371
Conserved hypothetical protein.
  
     0.640
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.