STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBG_3373Conserved hypothetical protein. (356 aa)    
Predicted Functional Partners:
fixA
FixA protein.
 
 
 0.745
fixX
Ferredoxin like protein FixX; Could be a 3Fe-4S cluster-containing protein.
 
 
 0.699
yggD
Putative transcriptional regulatory protein.
  
     0.675
fixB
FixB protein.
 
 
 0.585
yidR
Putative ATP/GTP-binding protein.
       0.566
csgE
Assembly/transport component in curli production.
  
     0.554
csgF
Assembly/transport component in curli production.
  
     0.541
SBG_3977
Conserved hypothetical protein.
  
     0.541
srlD
Sorbitol-6-phosphate 2-dehydrogenase (glucitol-6-phosphate dehydrogenase); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.500
yccT
Putative secreted protein; Belongs to the UPF0319 family.
  
     0.499
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.