Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SBOV24451_1 | atpI | SBG_2159 | SBG_3424 | Conserved hypothetical protein. | ATP synthase protein I. | 0.666 |
| SBOV24451_1 | syd | SBG_2159 | SBG_2582 | Conserved hypothetical protein. | Syd protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family. | 0.664 |
| SBOV24451_1 | wecF_2 | SBG_2159 | SBG_3470 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.403 |
| SBOV24451_1 | yigP | SBG_2159 | SBG_3504 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.597 |
| aarF | tatB | SBG_3505 | SBG_3507 | Ubiquinone biosynthesis protein. | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.580 |
| aarF | ubiE | SBG_3505 | SBG_3503 | Ubiquinone biosynthesis protein. | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE. | 0.879 |
| aarF | yigN | SBG_3505 | SBG_3502 | Ubiquinone biosynthesis protein. | Putative membrane protein. | 0.581 |
| aarF | yigP | SBG_3505 | SBG_3504 | Ubiquinone biosynthesis protein. | Conserved hypothetical protein. | 0.906 |
| atpI | SBOV24451_1 | SBG_3424 | SBG_2159 | ATP synthase protein I. | Conserved hypothetical protein. | 0.666 |
| atpI | syd | SBG_3424 | SBG_2582 | ATP synthase protein I. | Syd protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family. | 0.403 |
| atpI | wecF_2 | SBG_3424 | SBG_3470 | ATP synthase protein I. | Conserved hypothetical protein. | 0.744 |
| atpI | yigA | SBG_3424 | SBG_3482 | ATP synthase protein I. | Conserved hypothetical protein. | 0.463 |
| atpI | yigP | SBG_3424 | SBG_3504 | ATP synthase protein I. | Conserved hypothetical protein. | 0.693 |
| syd | SBOV24451_1 | SBG_2582 | SBG_2159 | Syd protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family. | Conserved hypothetical protein. | 0.664 |
| syd | atpI | SBG_2582 | SBG_3424 | Syd protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family. | ATP synthase protein I. | 0.403 |
| syd | ybeD | SBG_2582 | SBG_0544 | Syd protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family. | Conserved hypothetical protein; Belongs to the UPF0250 family. | 0.621 |
| syd | yigA | SBG_2582 | SBG_3482 | Syd protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family. | Conserved hypothetical protein. | 0.672 |
| syd | yigP | SBG_2582 | SBG_3504 | Syd protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family. | Conserved hypothetical protein. | 0.660 |
| tatB | aarF | SBG_3507 | SBG_3505 | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | Ubiquinone biosynthesis protein. | 0.580 |
| tatB | ubiE | SBG_3507 | SBG_3503 | Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE. | 0.623 |
page 1 of 3