Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dnaE | dnaX | SBG_0222 | SBG_0430 | DNA polymerase III, alpha chain. | DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.996 |
| dnaE | holC | SBG_0222 | SBG_3896 | DNA polymerase III, alpha chain. | DNA polymerase III, chi subunit. | 0.990 |
| dnaE | rpsB | SBG_0222 | SBG_0207 | DNA polymerase III, alpha chain. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.473 |
| dnaE | rpsG | SBG_0222 | SBG_3056 | DNA polymerase III, alpha chain. | 30S ribosomal subunit protein S7. | 0.426 |
| dnaE | ssb | SBG_0222 | SBG_3700 | DNA polymerase III, alpha chain. | Single-strand DNA-binding protein. | 0.926 |
| dnaE | topA | SBG_0222 | SBG_1577 | DNA polymerase III, alpha chain. | DNA topoisomerase I, omega protein I. | 0.516 |
| dnaX | dnaE | SBG_0430 | SBG_0222 | DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | DNA polymerase III, alpha chain. | 0.996 |
| dnaX | holC | SBG_0430 | SBG_3896 | DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | DNA polymerase III, chi subunit. | 0.990 |
| dnaX | rpsJ | SBG_0430 | SBG_3050 | DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 30S ribosomal subunit protein S10. | 0.416 |
| dnaX | ssb | SBG_0430 | SBG_3700 | DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Single-strand DNA-binding protein. | 0.921 |
| dnaX | topA | SBG_0430 | SBG_1577 | DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | DNA topoisomerase I, omega protein I. | 0.529 |
| holC | dnaE | SBG_3896 | SBG_0222 | DNA polymerase III, chi subunit. | DNA polymerase III, alpha chain. | 0.990 |
| holC | dnaX | SBG_3896 | SBG_0430 | DNA polymerase III, chi subunit. | DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.990 |
| holC | ssb | SBG_3896 | SBG_3700 | DNA polymerase III, chi subunit. | Single-strand DNA-binding protein. | 0.900 |
| holC | topA | SBG_3896 | SBG_1577 | DNA polymerase III, chi subunit. | DNA topoisomerase I, omega protein I. | 0.463 |
| priA | ssb | SBG_3596 | SBG_3700 | Primosomal protein replication factor. | Single-strand DNA-binding protein. | 0.849 |
| rplJ | rpsB | SBG_3630 | SBG_0207 | 50S ribosomal subunit protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.994 |
| rplJ | rpsF | SBG_3630 | SBG_3835 | 50S ribosomal subunit protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 30s ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.994 |
| rplJ | rpsG | SBG_3630 | SBG_3056 | 50S ribosomal subunit protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 30S ribosomal subunit protein S7. | 0.998 |
| rplJ | rpsJ | SBG_3630 | SBG_3050 | 50S ribosomal subunit protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 30S ribosomal subunit protein S10. | 0.993 |
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