STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmuSHemin transport protein. (342 aa)    
Predicted Functional Partners:
hmuT
Hemin-binding periplasmic protein.
 
  
 0.992
hmuV
Hemin transport system ATP-binding protein.
   
 0.960
hmuU
Hemin transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.940
hmuR
Hemin receptor protein.
 
  
 0.896
dcuR
Two-component response regulator.
       0.561
dcuS
Two-component sensor kinase.
       0.561
gltB
Glutamate synthase [NADPH] large chain precursor.
       0.539
yqjH
Conserved hypothetical protein.
  
    0.538
btuC
Vitamin B12 transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
   
 0.525
fhuC
Ferrichrome transport ATP-binding protein FhuC.
   
 0.517
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.