STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjjQConserved hypothetical regulatory protein. (241 aa)    
Predicted Functional Partners:
bglJ
Conserved hypothetical regulatory protein.
 
   
 0.991
SBG_1437
Putative transferase.
  
   
 0.776
SBOV07181_1
Putative pectin esterase precursor.
  
     0.774
rna
Ribonuclease I precursor; Belongs to the RNase T2 family.
  
     0.763
torS
Two-component sensor protein histidine protein kinase.
  
 
 0.760
yhjS
Conserved hypothetical protein.
  
     0.759
sbmC
Putative DNA gyrase inhibitory protein.
  
     0.756
hslJ
Heat shock protein.
  
    0.742
malM
Maltose operon periplasmic protein.
  
     0.734
wcaC
Putative glycosyltransferase.
  
     0.731
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.