STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB0537Putative alpha-amylase; Similar to the C-terminal region of Bacillus licheniformis amys alpha-amylase precursor (ec 3.2.1.1) (1,4-alpha-d-glucan glucanohydrolase) UniProt:AMY_BACLI (EMBL:A17930) (512 aa) fasta scores: E()=1.2e-86, 42.562% id in 484 aa. (487 aa)    
Predicted Functional Partners:
SUB0660
Putative pullulanase; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.950
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.939
malM
Putative 4-alpha-glucanotransferase.
 
 
 0.930
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.924
glgP-2
Putative glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.924
SUB0237
Endonuclease/exonuclease/phosphatase family protein.
  
 
 0.911
ccpA
Catabolite control protein A.
  
  
 0.809
SUB0016
Putative amino acid permease.
   
 0.677
SUB0538
Putative glycosyltransferase.
  
 
 0.653
SUB0539
Putative glycosyltransferase.
  
 
 0.653
Your Current Organism:
Streptococcus uberis
NCBI taxonomy Id: 218495
Other names: S. uberis 0140J, Streptococcus uberis 0140J, Streptococcus uberis str. 0140J
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