STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clpP-4Endopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (216 aa)    
Predicted Functional Partners:
clpX
ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
 0.994
clpP
Endopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
 
 
0.985
EEP70272.1
ATPase.
  
 
 0.832
EEP72070.1
ATPase; Belongs to the ClpA/ClpB family.
  
 
 0.827
EEP72672.1
ATPase; Belongs to the ClpA/ClpB family.
  
 
 0.823
EEP75135.1
ATPase; Belongs to the ClpA/ClpB family.
  
 
 0.823
EEP72797.1
Oligopeptidase B.
   
  
 0.794
EEP72428.1
Endopeptidase Clp.
   
 
 0.784
EEP73634.1
Conserved hypothetical protein.
   
 
 0.784
groS
Hypothetical protein; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
 
 
 0.728
Your Current Organism:
Micromonospora sp. ATCC 39149
NCBI taxonomy Id: 219305
Other names: M. sp. ATCC 39149, Micromonospora carbonacea var. africana, Micromonospora sp. NRRL 15099
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.