STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP73618.1Hypothetical protein. (340 aa)    
Predicted Functional Partners:
EEP73619.1
Hypothetical protein.
 
  
 0.960
EEP73615.1
Hypothetical protein.
 
  
 0.933
EEP73611.1
Hypothetical protein.
 
  
 0.831
EEP73617.1
Hypothetical protein.
  
    0.827
EEP73620.1
Hypothetical protein.
  
 
  0.818
EEP73616.1
Nitroreductase; Truncated CDS.
    
  0.816
EEP71301.1
uroporphyrin-III C-methyltransferase.
    
 0.707
EEP71877.1
Uroporphyrinogen III synthase HEM4.
  
 
 0.655
EEP71032.1
Phosphoglycerate mutase.
    
  0.612
EEP71830.1
Molybdopterin biosynthesis protein moeZ.
    
  0.585
Your Current Organism:
Micromonospora sp. ATCC 39149
NCBI taxonomy Id: 219305
Other names: M. sp. ATCC 39149, Micromonospora carbonacea var. africana, Micromonospora sp. NRRL 15099
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.