STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP73626.1Tryptophanase. (596 aa)    
Predicted Functional Partners:
EEP73624.1
Reductase.
 
  
  0.893
EEP73629.1
Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
 
     0.826
EEP73630.1
Short-chain acyl-CoA dehydrogenase.
 
     0.799
EEP73625.1
UDP-glucose:sterol glucosyltransferase.
  
    0.779
EEP73623.1
Methyltransferase type 11.
  
    0.774
EEP73622.1
P450 monooxygenase encR; Belongs to the cytochrome P450 family.
       0.773
EEP73627.1
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.773
hisC-2
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
       0.773
EEP73631.1
Ester cyclase.
 
     0.763
EEP71972.1
Hypothetical protein.
   
    0.653
Your Current Organism:
Micromonospora sp. ATCC 39149
NCBI taxonomy Id: 219305
Other names: M. sp. ATCC 39149, Micromonospora carbonacea var. africana, Micromonospora sp. NRRL 15099
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