STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP73630.1Short-chain acyl-CoA dehydrogenase. (414 aa)    
Predicted Functional Partners:
EEP74166.1
3-hydroxyacyl-CoA dehydrogenase NAD-binding.
  
 0.944
EEP72741.1
enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.928
EEP70854.1
AMP-dependent synthetase and ligase.
  
  0.917
EEP70941.1
AMP-dependent synthetase and ligase.
  
  0.917
EEP72933.1
acyl-CoA synthetase.
   
 
  0.907
EEP72695.1
acyl-CoA synthetase.
   
 
  0.905
EEP73823.1
Electron transfer flavoprotein alpha/beta subunit.
 
 0.890
EEP73824.1
Electron transfer flavoprotein alpha subunit; Unextendable partial coding region.
 
 0.886
EEP74310.1
acyl-CoA synthetase.
   
 
  0.884
EEP74961.1
AMP-dependent synthetase and ligase.
  
  0.872
Your Current Organism:
Micromonospora sp. ATCC 39149
NCBI taxonomy Id: 219305
Other names: M. sp. ATCC 39149, Micromonospora carbonacea var. africana, Micromonospora sp. NRRL 15099
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.