STRINGSTRING
t1107 protein (Salmonella enterica CT18) - STRING interaction network
"t1107" - annotation not available in Salmonella enterica CT18
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
t1107annotation not available (137 aa)    
Predicted Functional Partners:
t1108
annotation not available (242 aa)
     
 
  0.986
cdtB
Cytolethal distending toxin subunit B homolog; Produces a CDT (cytolethal distending toxin) activity, which causes DNA damage in intoxicated cells. This damage induces G2/M cell cycle arrest, chromatin fragmentation, cell distention and nucleus enlargement (269 aa)
     
 
  0.902
t1109
annotation not available (180 aa)
   
        0.760
STY0114
annotation not available (146 aa)
     
        0.573
aroD
3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate. The reaction involves the formation of an imine intermediate between the keto group of 3-dehydroquinate and the epsylon-amino group of Lys-170 at the active site; Belongs to the type-I 3-dehydroquinase family (252 aa)
     
        0.564
t3386
annotation not available (247 aa)
     
        0.547
t1476
annotation not available (234 aa)
     
   
  0.506
t3931
annotation not available (215 aa)
     
        0.461
t2117
annotation not available (359 aa)
     
        0.459
t3042
annotation not available (208 aa)
     
        0.457
Your Current Organism:
Salmonella enterica CT18
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica CT18, Salmonella enterica Typhi, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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