STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STY0220Ferrichrome-binding periplasmic protein precursor; Orthologue of E. coli fhuD (FHUD_ECOLI); Fasta hit to FHUD_ECOLI (296 aa), 84% identity in 292 aa overlap. (296 aa)    
Predicted Functional Partners:
STY0219
Ferrichrome transport ATP-binding protein FhuC; Fasta hit to FEPC_ECOLI (271 aa), 44% identity in 237 aa overlap; Fasta hit to FECE_ECOLI (255 aa), 44% identity in 239 aa overlap; Fasta hit to LIVF_ECOLI (237 aa), 30% identity in 225 aa overlap; Fasta hit to PHNK_ECOLI (252 aa), 30% identity in 217 aa overlap; Fasta hit to HISP_ECOLI (257 aa), 32% identity in 224 aa overlap; Fasta hit to BTUD_ECOLI (249 aa), 35% identity in 232 aa overlap; Fasta hit to PHNL_ECOLI (226 aa), 33% identity in 216 aa overlap; Fasta hit to PHNC_ECOLI (262 aa), 32% identity in 232 aa overlap; Fasta hit to NIK [...]
 
 0.999
STY0221
Ferrichrome transport protein FhuB precursor; Orthologue of E. coli fhuB (FHUB_ECOLI); Fasta hit to FHUB_ECOLI (660 aa), 90% identity in 652 aa overlap; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.999
STY0634
Ferric enterobactin transport ATP-binding protein FepC; Fasta hit to SSUB_ECOLI (255 aa), 33% identity in 225 aa overlap; Fasta hit to FHUC_ECOLI (265 aa), 45% identity in 237 aa overlap; Fasta hit to FECE_ECOLI (255 aa), 49% identity in 250 aa overlap; Fasta hit to HISP_ECOLI (257 aa), 31% identity in 229 aa overlap; Fasta hit to PHNC_ECOLI (262 aa), 30% identity in 246 aa overlap; Fasta hit to YECC_ECOLI (250 aa), 31% identity in 225 aa overlap; Fasta hit to YRBF_ECOLI (269 aa), 30% identity in 267 aa overlap; Fasta hit to GLNQ_ECOLI (240 aa), 33% identity in 220 aa overlap; Fasta hi [...]
 
 
 0.833
STY0636
Ferric enterobactin transport protein FepD; Fasta hit to FECD_ECOLI (318 aa), 37% identity in 317 aa overlap; Fasta hit to BTUC_ECOLI (326 aa), 39% identity in 318 aa overlap; Fasta hit to FECC_ECOLI (332 aa), 38% identity in 330 aa overlap; Fasta hit to FEPG_ECOLI (330 aa), 36% identity in 331 aa overlap; Orthologue of E. coli fepD (FEPD_ECOLI); Fasta hit to FEPD_ECOLI (334 aa), 89% identity in 333 aa overlap; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.831
STY0802
ABC transporter permease (FecCD_family); Similar to Corynebacterium diphtheriae HmuU hmuU TR:Q9XD88 (EMBL:AF109162) (350 aa) fasta scores: E(): 0, 37.0% id in 332 aa, and to Yersinia pestis hemin transport system permease protein HmuU hmuU SW:HMUU_YERPE (Q56992) (334 aa) fasta scores: E(): 0, 36.8% id in 323 aa; Fasta hit to FECD_ECOLI (318 aa), 32% identity in 324 aa overlap; Fasta hit to BTUC_ECOLI (326 aa), 33% identity in 332 aa overlap; Fasta hit to FECC_ECOLI (332 aa), 34% identity in 335 aa overlap; Fasta hit to FEPG_ECOLI (330 aa), 32% identity in 339 aa overlap; Paralogue of E [...]
 
 
 0.790
STY1770
Vitamin B12 transport system permease; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.
 
 
 
 0.695
STY4903
Ferric iron reductase protein; Similar to Escherichia coli ferric hydroxamate transport protein FhuF. ferric iron reductase protein FhuF SW:FHUF_ECOLI () (262 aa) fasta scores: E(): 0, 73.3% id in 262 aa.
 
    0.690
STY2489
Putative ABC transporter ATP-binding protein; Orthologue of E. coli yojI (YOJI_ECOLI); Fasta hit to YOJI_ECOLI (547 aa), 91% identity in 547 aa overlap. Contains hydrophobic, probable membrane-spanning regions.
 
    0.685
STY0635
Ferric enterobactin transport protein FepG; Fasta hit to FECD_ECOLI (318 aa), 37% identity in 322 aa overlap; Fasta hit to FEPD_ECOLI (334 aa), 36% identity in 332 aa overlap; Fasta hit to BTUC_ECOLI (326 aa), 38% identity in 291 aa overlap; Fasta hit to FECC_ECOLI (332 aa), 33% identity in 317 aa overlap; Orthologue of E. coli fepG (FEPG_ECOLI); Fasta hit to FEPG_ECOLI (330 aa), 87% identity in 329 aa overlap; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.656
STY0803
Similar to Bacillus subtilis ferrichrome transport ATP-binding protein FhuC fhuC SW:FHUC_BACSU (P49938) (269 aa) fasta scores: E(): 6.7e-25, 35.7% id in 244 aa, and to Erwinia chrysanthemi achromobactin transport ATP-binding protein CbrD cbrD SW:CBRD_ERWCH (Q47087) (273 aa) fasta scores: E(): 2.9e-24, 35.7% id in 244 aa, and to Escherichia coli ferric enterobactin transport ATP-binding protein FepC fepC SW:FEPC_ECOLI (P23878; P75724; P77096) (271 aa) fasta scores: E(): 3e-22, 34.2% id in 240 aa; Fasta hit to YCFV_ECOLI (233 aa), 31% identity in 227 aa overlap; Fasta hit to ZNUC_ECOLI ( [...]
  
 
 0.648
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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