STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STY1014Putative DNA methylase; Paralogue of E. coli dam (DMA_ECOLI); Fasta hit to DMA_ECOLI (278 aa), 46% identity in 266 aa overlap. (293 aa)    
Predicted Functional Partners:
STY1013
Putative bacteriophage protein; No significant database matches.
       0.783
STY1015
Putative bacteriophage protein; No significant database matches.
       0.773
STY3148
DNA mismatch repair protein; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair; Belongs to the MutH family.
  
   
 0.700
int
Integrase; Similar to Bacteriophage 933W, and Bacteriophage VT2-Sa integrase int TR:Q9XJG6 (EMBL:AF125520) fasta scores: E(): 0, 60.4% id in 427 aa, and to Escherichia coli O157:H7 integrase INT TR:BAA94099 (EMBL:AP000422) fasta scores: E(): 0, 60.4% id in 427 aa; Belongs to the 'phage' integrase family.
       0.645
xis
Excisionase; Similar to Escherichia coli O157:H7 excisionase Xis TR:BAA94100 (EMBL:AP000422) fasta scores: E(): 5.4e-14, 49.4% id in 77 aa.
       0.645
STY1016
Exonuclease; Similar to Bacteriophage lambda exonuclease Exo or RedX or RED-ALPHA SW:EXO_LAMBD (P03697) fasta scores: E(): 0, 84.5% id in 226 aa.
  
    0.632
betA
Similar to Bacteriophage lambda recombination protein BetA OR RedB SW:VBET_LAMBD (P03698) fasta scores: E(): 0, 95.0% id in 261 aa.
       0.579
gam
Similar to Bacteriophage 933W host-nuclease inhibitor protein Gam TR:Q9XJI0 (EMBL:AF125520) fasta scores: E(): 2.2e-28, 72.2% id in 97 aa.
       0.568
STY2717
Putative oxidoreductase; Fasta hit to YGFT_ECOLI (639 aa), 51% identity in 649 aa overlap; Orthologue of E. coli yffG (AEGA_ECOLI); Fasta hit to AEGA_ECOLI (659 aa), 81% identity in 651 aa overlap. Expressed in E. coli under anaerobic conditions. This sequence contains an internal deletion of 33 aa with respect to the corresponding E. coli sequence.
      
 0.561
STY3637
Putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55).
  
   
 0.560
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.