STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STY3117L-fuculose kinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. (472 aa)    
Predicted Functional Partners:
STY3116
L-fuculose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
 
 
 0.989
STY3113
Fuculose-1-phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.
 
 
 0.980
STY3118
Fuscose operon fucU protein; Involved in the anomeric conversion of L-fucose.
 
  
 0.955
STY3119
L-fucose operon activator; Fasta hit to YDJF_ECOLI (252 aa), 31% identity in 229 aa overlap; Orthologue of E. coli fucR (FUCR_ECOLI); Fasta hit to FUCR_ECOLI (243 aa), 89% identity in 235 aa overlap.
 
  
 0.887
STY3112
1,2-propanediol oxidoreductase (lactaldehyde reductase); Fasta hit to EUTG_ECOLI (395 aa), 40% identity in 372 aa overlap; Fasta hit to ADH2_ECOLI (383 aa), 44% identity in 371 aa overlap; Orthologue of E. coli fucO (FUCO_ECOLI); Fasta hit to FUCO_ECOLI (383 aa), 91% identity in 382 aa overlap.
     
 0.808
STY3827
L-rhamnose isomerase; Orthologue of E. coli rhaA (RHAA_ECOLI); Fasta hit to RHAA_ECOLI (419 aa), 94% identity in 418 aa overlap.
  
  
 0.793
STY3115
L-fucose permease; Orthologue of E. coli fucP (FUCP_ECOLI); Fasta hit to FUCP_ECOLI (438 aa), 92% identity in 438 aa overlap.
     
 0.609
STY2513
Anaerobic glycerol-3-phosphate dehydrogenase subunit A; Orthologue of E. coli glpA (GLPA_ECOLI); Fasta hit to GLPA_ECOLI (542 aa), 93% identity in 542 aa overlap; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.592
STY4137
D-xylose isomerase; Orthologue of E. coli xylA (XYLA_ECOLI); Fasta hit to XYLA_ECOLI (440 aa), 92% identity in 440 aa overlap; Belongs to the xylose isomerase family.
  
  
 0.572
STY0122
DedA family integral membrane protein; Similar to Escherichia coli hypothetical 28.2 kda protein in arac-tbpa intergenic region YABI SW:YABI_ECOLI (P30149; P75634) fasta scores: E(): 0, 89.4% id in 254 aa, and to Escherichia coli deda protein DEDA SW:DEDA_ECOLI (P09548) fasta scores: E(): 1.6e-07, 27.5% id in 204 aa; Orthologue of E. coli yabI (YABI_ECOLI); Fasta hit to YABI_ECOLI (254 aa), 89% identity in 254 aa overlap.
      
 0.569
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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