Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| STY2396 | STY4177 | gene:17586301 | gene:17588015 | Similar to Salmonella typhimurium periplasmic beta-glucosidase precursor SW:BGLX_SALTY (Q56078) (765 aa) fasta scores: E(): 0, 99.0% id in 765 aa. Contains probable N-terminal signal sequence; Orthologue of E. coli bglX (BGLX_ECOLI); Fasta hit to BGLX_ECOLI (765 aa), 93% identity in 765 aa overlap; Belongs to the glycosyl hydrolase 3 family. | Putative membrane protein; Orthologue of E. coli YHJT_ECOLI; Fasta hit to YHJT_ECOLI (62 aa), 81% identity in 62 aa overlap. Contains an hydrophobic, possible membrane-spanning region. | 0.426 |
| STY2396 | yhjM | gene:17586301 | gene:17588021 | Similar to Salmonella typhimurium periplasmic beta-glucosidase precursor SW:BGLX_SALTY (Q56078) (765 aa) fasta scores: E(): 0, 99.0% id in 765 aa. Contains probable N-terminal signal sequence; Orthologue of E. coli bglX (BGLX_ECOLI); Fasta hit to BGLX_ECOLI (765 aa), 93% identity in 765 aa overlap; Belongs to the glycosyl hydrolase 3 family. | Probable endoglucanase precursor; Hydrolyzes carboxymethylcellulose; Belongs to the glycosyl hydrolase 8 (cellulase D) family. | 0.813 |
| STY2396 | yhjO | gene:17586301 | gene:17588019 | Similar to Salmonella typhimurium periplasmic beta-glucosidase precursor SW:BGLX_SALTY (Q56078) (765 aa) fasta scores: E(): 0, 99.0% id in 765 aa. Contains probable N-terminal signal sequence; Orthologue of E. coli bglX (BGLX_ECOLI); Fasta hit to BGLX_ECOLI (765 aa), 93% identity in 765 aa overlap; Belongs to the glycosyl hydrolase 3 family. | Putative polysaccharide biosynthesis protein catalytic subunit; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose, which is produced as an extracellular component for mechanical and chemical protection at the onset of the stationary phase, when the cells exhibit multicellular behavior (rdar morphotype). Coexpression of cellulose and thin aggregative fimbriae leads to a hydrophobic network with tightly packed cells embedded in a highly inert matrix (By similarity). | 0.463 |
| STY4176 | STY4177 | gene:17588014 | gene:17588015 | Putative membrane protein; Orthologue of E. coli yhjU (YHJU_ECOLI); Fasta hit to YHJU_ECOLI (559 aa), 85% identity in 559 aa overlap. N-terminus contains hydrophobic, probable membrane-spanning regions. | Putative membrane protein; Orthologue of E. coli YHJT_ECOLI; Fasta hit to YHJT_ECOLI (62 aa), 81% identity in 62 aa overlap. Contains an hydrophobic, possible membrane-spanning region. | 0.987 |
| STY4176 | STY4178 | gene:17588014 | gene:17588016 | Putative membrane protein; Orthologue of E. coli yhjU (YHJU_ECOLI); Fasta hit to YHJU_ECOLI (559 aa), 85% identity in 559 aa overlap. N-terminus contains hydrophobic, probable membrane-spanning regions. | Conserved hypothetical protein; Orthologue of E. coli yhjS (YHJS_ECOLI); Fasta hit to YHJS_ECOLI (523 aa), 80% identity in 519 aa overlap. | 0.996 |
| STY4176 | STY4179 | gene:17588014 | gene:17588017 | Putative membrane protein; Orthologue of E. coli yhjU (YHJU_ECOLI); Fasta hit to YHJU_ECOLI (559 aa), 85% identity in 559 aa overlap. N-terminus contains hydrophobic, probable membrane-spanning regions. | Conserved hypothetical protein; Orthologue of E. coli YHJR_ECOLI; Fasta hit to YHJR_ECOLI (62 aa), 77% identity in 60 aa overlap. | 0.706 |
| STY4176 | STY4182 | gene:17588014 | gene:17588020 | Putative membrane protein; Orthologue of E. coli yhjU (YHJU_ECOLI); Fasta hit to YHJU_ECOLI (559 aa), 85% identity in 559 aa overlap. N-terminus contains hydrophobic, probable membrane-spanning regions. | Putative polysaccharide biosynthesis protein subunit B; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | 0.976 |
| STY4176 | yhjM | gene:17588014 | gene:17588021 | Putative membrane protein; Orthologue of E. coli yhjU (YHJU_ECOLI); Fasta hit to YHJU_ECOLI (559 aa), 85% identity in 559 aa overlap. N-terminus contains hydrophobic, probable membrane-spanning regions. | Probable endoglucanase precursor; Hydrolyzes carboxymethylcellulose; Belongs to the glycosyl hydrolase 8 (cellulase D) family. | 0.975 |
| STY4176 | yhjO | gene:17588014 | gene:17588019 | Putative membrane protein; Orthologue of E. coli yhjU (YHJU_ECOLI); Fasta hit to YHJU_ECOLI (559 aa), 85% identity in 559 aa overlap. N-terminus contains hydrophobic, probable membrane-spanning regions. | Putative polysaccharide biosynthesis protein catalytic subunit; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose, which is produced as an extracellular component for mechanical and chemical protection at the onset of the stationary phase, when the cells exhibit multicellular behavior (rdar morphotype). Coexpression of cellulose and thin aggregative fimbriae leads to a hydrophobic network with tightly packed cells embedded in a highly inert matrix (By similarity). | 0.969 |
| STY4176 | yhjQ | gene:17588014 | gene:17588018 | Putative membrane protein; Orthologue of E. coli yhjU (YHJU_ECOLI); Fasta hit to YHJU_ECOLI (559 aa), 85% identity in 559 aa overlap. N-terminus contains hydrophobic, probable membrane-spanning regions. | Conserved hypothetical protein; Essential for cellulose biosynthesis. May play a role in subcellular localization of an active cellulose biosynthesis apparatus at the bacterial cell pole (By similarity); Belongs to the BcsQ family. | 0.915 |
| STY4177 | STY2396 | gene:17588015 | gene:17586301 | Putative membrane protein; Orthologue of E. coli YHJT_ECOLI; Fasta hit to YHJT_ECOLI (62 aa), 81% identity in 62 aa overlap. Contains an hydrophobic, possible membrane-spanning region. | Similar to Salmonella typhimurium periplasmic beta-glucosidase precursor SW:BGLX_SALTY (Q56078) (765 aa) fasta scores: E(): 0, 99.0% id in 765 aa. Contains probable N-terminal signal sequence; Orthologue of E. coli bglX (BGLX_ECOLI); Fasta hit to BGLX_ECOLI (765 aa), 93% identity in 765 aa overlap; Belongs to the glycosyl hydrolase 3 family. | 0.426 |
| STY4177 | STY4176 | gene:17588015 | gene:17588014 | Putative membrane protein; Orthologue of E. coli YHJT_ECOLI; Fasta hit to YHJT_ECOLI (62 aa), 81% identity in 62 aa overlap. Contains an hydrophobic, possible membrane-spanning region. | Putative membrane protein; Orthologue of E. coli yhjU (YHJU_ECOLI); Fasta hit to YHJU_ECOLI (559 aa), 85% identity in 559 aa overlap. N-terminus contains hydrophobic, probable membrane-spanning regions. | 0.987 |
| STY4177 | STY4178 | gene:17588015 | gene:17588016 | Putative membrane protein; Orthologue of E. coli YHJT_ECOLI; Fasta hit to YHJT_ECOLI (62 aa), 81% identity in 62 aa overlap. Contains an hydrophobic, possible membrane-spanning region. | Conserved hypothetical protein; Orthologue of E. coli yhjS (YHJS_ECOLI); Fasta hit to YHJS_ECOLI (523 aa), 80% identity in 519 aa overlap. | 0.993 |
| STY4177 | STY4179 | gene:17588015 | gene:17588017 | Putative membrane protein; Orthologue of E. coli YHJT_ECOLI; Fasta hit to YHJT_ECOLI (62 aa), 81% identity in 62 aa overlap. Contains an hydrophobic, possible membrane-spanning region. | Conserved hypothetical protein; Orthologue of E. coli YHJR_ECOLI; Fasta hit to YHJR_ECOLI (62 aa), 77% identity in 60 aa overlap. | 0.900 |
| STY4177 | STY4182 | gene:17588015 | gene:17588020 | Putative membrane protein; Orthologue of E. coli YHJT_ECOLI; Fasta hit to YHJT_ECOLI (62 aa), 81% identity in 62 aa overlap. Contains an hydrophobic, possible membrane-spanning region. | Putative polysaccharide biosynthesis protein subunit B; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | 0.968 |
| STY4177 | yhjM | gene:17588015 | gene:17588021 | Putative membrane protein; Orthologue of E. coli YHJT_ECOLI; Fasta hit to YHJT_ECOLI (62 aa), 81% identity in 62 aa overlap. Contains an hydrophobic, possible membrane-spanning region. | Probable endoglucanase precursor; Hydrolyzes carboxymethylcellulose; Belongs to the glycosyl hydrolase 8 (cellulase D) family. | 0.895 |
| STY4177 | yhjO | gene:17588015 | gene:17588019 | Putative membrane protein; Orthologue of E. coli YHJT_ECOLI; Fasta hit to YHJT_ECOLI (62 aa), 81% identity in 62 aa overlap. Contains an hydrophobic, possible membrane-spanning region. | Putative polysaccharide biosynthesis protein catalytic subunit; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose, which is produced as an extracellular component for mechanical and chemical protection at the onset of the stationary phase, when the cells exhibit multicellular behavior (rdar morphotype). Coexpression of cellulose and thin aggregative fimbriae leads to a hydrophobic network with tightly packed cells embedded in a highly inert matrix (By similarity). | 0.918 |
| STY4177 | yhjQ | gene:17588015 | gene:17588018 | Putative membrane protein; Orthologue of E. coli YHJT_ECOLI; Fasta hit to YHJT_ECOLI (62 aa), 81% identity in 62 aa overlap. Contains an hydrophobic, possible membrane-spanning region. | Conserved hypothetical protein; Essential for cellulose biosynthesis. May play a role in subcellular localization of an active cellulose biosynthesis apparatus at the bacterial cell pole (By similarity); Belongs to the BcsQ family. | 0.941 |
| STY4178 | STY4176 | gene:17588016 | gene:17588014 | Conserved hypothetical protein; Orthologue of E. coli yhjS (YHJS_ECOLI); Fasta hit to YHJS_ECOLI (523 aa), 80% identity in 519 aa overlap. | Putative membrane protein; Orthologue of E. coli yhjU (YHJU_ECOLI); Fasta hit to YHJU_ECOLI (559 aa), 85% identity in 559 aa overlap. N-terminus contains hydrophobic, probable membrane-spanning regions. | 0.996 |
| STY4178 | STY4177 | gene:17588016 | gene:17588015 | Conserved hypothetical protein; Orthologue of E. coli yhjS (YHJS_ECOLI); Fasta hit to YHJS_ECOLI (523 aa), 80% identity in 519 aa overlap. | Putative membrane protein; Orthologue of E. coli YHJT_ECOLI; Fasta hit to YHJT_ECOLI (62 aa), 81% identity in 62 aa overlap. Contains an hydrophobic, possible membrane-spanning region. | 0.993 |
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