STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prtM2Peptidylprolyl isomerase; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins. (309 aa)    
Predicted Functional Partners:
lp_1283
Membrane sulfatase, alkaline phosphatase superfamily protein.
 
   
 0.750
lp_2580
Sulfatase, alkaline phosphatase superfamily,membrane-bound.
 
  
 0.745
lp_1865
Hypothetical protein, DUF1250 family; Belongs to the UPF0346 family.
  
    0.727
lp_1891
Hypothetical protein.
  
     0.725
lp_2243
Type I restriction-modification system,adenine-specific methyltransferase subunit.
  
     0.715
lp_1357
Extracellular protein, membrane-anchored.
   
    0.704
lp_1877
Hypothetical protein, tetratricopeptide repeat (TPR) family.
 
  
 0.697
lp_1146
Lipoprotein, pheromone precursor.
  
    0.641
ftsQ
Cell division initiation protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
  
 0.540
yidC2
Preprotein translocase, YidC subunit; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily.
 
  
 0.517
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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