STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OB0076Serine:threonine protein kinase; CDS_ID OB0076. (310 aa)    
Predicted Functional Partners:
OB0075
Hypothetical conserved protein; CDS_ID OB0075.
 
    0.954
OB0074
Stage II sporulation protein E; CDS_ID OB0074.
 
 
 0.933
OB1897
Hypothetical conserved protein; CDS_ID OB1897.
  
     0.750
OB0069
Hypothetical conserved protein; CDS_ID OB0069.
 
     0.748
OB2107
Germination (cortex hydrolysis) and sporulation (stage II, multiple polar septa) protein; CDS_ID OB2107.
  
     0.742
OB1207
Hypothetical conserved protein; CDS_ID OB1207; Belongs to the UPF0736 family.
  
     0.740
spoIVFA
Stage IV sporulation protein FA; CDS_ID OB2048.
  
    0.740
spoIIIAF
Stage III sporulation protein AF (mutants block sporulation after engulfment); CDS_ID OB1889.
  
     0.724
OB1906
Hypothetical conserved protein; CDS_ID OB1906.
  
     0.718
OB2031
Hypothetical conserved protein; CDS_ID OB2031.
  
     0.711
Your Current Organism:
Oceanobacillus iheyensis
NCBI taxonomy Id: 221109
Other names: O. iheyensis HTE831, Oceanobacillus iheyensis HTE831, Oceanobacillus iheyensis str. HTE831, Oceanobacillus iheyensis strain HTE831, marine firmicute HTE831
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.