STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OB0901Glutamate-1-semialdehyde aminotransferase; CDS_ID OB0901. (432 aa)    
Predicted Functional Partners:
hemB
Porphobilinogen synthase (delta-aminolevulinic acid dehydratase); CDS_ID OB2066; Belongs to the ALAD family.
 
 
 0.990
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
 0.986
hemL
Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8); CDS_ID OB2065.
  
  
 
0.904
hemC
Hydroxymethylbilane synthase (porphobilinogen deaminase); Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
  
 0.894
dhbF
Monomodular nonribosomal peptide synthetase; CDS_ID OB0958.
  
 
 0.867
OB2067
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
 
  
 0.793
OB1655
uroporphyrin-III C-methyltransferase; CDS_ID OB1655; Belongs to the precorrin methyltransferase family.
 
   
 0.723
OB1657
uroporphyrin-III C-methyltransferase (siroheme synthase); CDS_ID OB1657.
   
 0.672
fabD
Malonyl CoA-acyl carrier protein transacylase; CDS_ID OB1523.
    
 0.611
OB0902
Hypothetical conserved protein; CDS_ID OB0902.
       0.594
Your Current Organism:
Oceanobacillus iheyensis
NCBI taxonomy Id: 221109
Other names: O. iheyensis HTE831, Oceanobacillus iheyensis HTE831, Oceanobacillus iheyensis str. HTE831, Oceanobacillus iheyensis strain HTE831, marine firmicute HTE831
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