Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MS0813 | MS0814 | MS0813 | MS0814 | Unknown. | Unknown. | 0.501 |
MS0813 | pepD | MS0813 | MS0815 | Unknown. | PepD protein; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.501 |
MS0814 | MS0813 | MS0814 | MS0813 | Unknown. | Unknown. | 0.501 |
MS0814 | pepD | MS0814 | MS0815 | Unknown. | PepD protein; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.773 |
pepD | MS0813 | MS0815 | MS0813 | PepD protein; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | Unknown. | 0.501 |
pepD | MS0814 | MS0815 | MS0814 | PepD protein; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | Unknown. | 0.773 |
pepD | pepP | MS0815 | MS0479 | PepD protein; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | PepP protein; Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. | 0.403 |
pepP | pepD | MS0479 | MS0815 | PepP protein; Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. | PepD protein; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.403 |