Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MS0312 | MS1286 | MS0312 | MS1286 | Unknown; Uncharacterized lipoprotein. | Unknown. | 0.766 |
MS0312 | MS1787 | MS0312 | MS1787 | Unknown; Uncharacterized lipoprotein. | Unknown. | 0.764 |
MS0312 | ftsN | MS0312 | MS0450 | Unknown; Uncharacterized lipoprotein. | Cell division protein. | 0.768 |
MS0312 | matP | MS0312 | MS1196 | Unknown; Uncharacterized lipoprotein. | Unknown; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain. | 0.769 |
MS0312 | mukB | MS0312 | MS1084 | Unknown; Uncharacterized lipoprotein. | MukB protein; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily. | 0.770 |
MS0312 | mukE | MS0312 | MS1085 | Unknown; Uncharacterized lipoprotein. | MukE protein; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF. | 0.768 |
MS0312 | mukF | MS0312 | MS1086 | Unknown; Uncharacterized lipoprotein. | MukF protein; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity. | 0.771 |
MS0312 | ompA-3 | MS0312 | MS1220 | Unknown; Uncharacterized lipoprotein. | Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | 0.768 |
MS1286 | MS0312 | MS1286 | MS0312 | Unknown. | Unknown; Uncharacterized lipoprotein. | 0.766 |
MS1286 | MS1787 | MS1286 | MS1787 | Unknown. | Unknown. | 0.728 |
MS1286 | ftsN | MS1286 | MS0450 | Unknown. | Cell division protein. | 0.750 |
MS1286 | matP | MS1286 | MS1196 | Unknown. | Unknown; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain. | 0.756 |
MS1286 | mukB | MS1286 | MS1084 | Unknown. | MukB protein; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily. | 0.770 |
MS1286 | mukE | MS1286 | MS1085 | Unknown. | MukE protein; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF. | 0.771 |
MS1286 | mukF | MS1286 | MS1086 | Unknown. | MukF protein; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity. | 0.773 |
MS1286 | ompA-3 | MS1286 | MS1220 | Unknown. | Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | 0.745 |
MS1787 | MS0312 | MS1787 | MS0312 | Unknown. | Unknown; Uncharacterized lipoprotein. | 0.764 |
MS1787 | MS1286 | MS1787 | MS1286 | Unknown. | Unknown. | 0.728 |
MS1787 | ftsN | MS1787 | MS0450 | Unknown. | Cell division protein. | 0.762 |
MS1787 | matP | MS1787 | MS1196 | Unknown. | Unknown; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain. | 0.749 |
page 1 of 5