Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MS1578 | MS1580 | MS1578 | MS1580 | Unknown; Transposase. | Unknown. | 0.517 |
MS1578 | araJ | MS1578 | MS1579 | Unknown; Transposase. | AraJ protein; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family. | 0.517 |
MS1578 | dcd | MS1578 | MS1581 | Unknown; Transposase. | Dcd protein; Catalyzes the deamination of dCTP to dUTP. | 0.517 |
MS1578 | udk | MS1578 | MS1582 | Unknown; Transposase. | Udk protein; Uridine kinase. | 0.507 |
MS1580 | MS1578 | MS1580 | MS1578 | Unknown. | Unknown; Transposase. | 0.517 |
MS1580 | araJ | MS1580 | MS1579 | Unknown. | AraJ protein; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family. | 0.793 |
MS1580 | dcd | MS1580 | MS1581 | Unknown. | Dcd protein; Catalyzes the deamination of dCTP to dUTP. | 0.795 |
MS1580 | udk | MS1580 | MS1582 | Unknown. | Udk protein; Uridine kinase. | 0.780 |
araJ | MS1578 | MS1579 | MS1578 | AraJ protein; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family. | Unknown; Transposase. | 0.517 |
araJ | MS1580 | MS1579 | MS1580 | AraJ protein; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family. | Unknown. | 0.793 |
araJ | dcd | MS1579 | MS1581 | AraJ protein; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family. | Dcd protein; Catalyzes the deamination of dCTP to dUTP. | 0.793 |
araJ | udk | MS1579 | MS1582 | AraJ protein; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family. | Udk protein; Uridine kinase. | 0.761 |
dcd | MS1578 | MS1581 | MS1578 | Dcd protein; Catalyzes the deamination of dCTP to dUTP. | Unknown; Transposase. | 0.517 |
dcd | MS1580 | MS1581 | MS1580 | Dcd protein; Catalyzes the deamination of dCTP to dUTP. | Unknown. | 0.795 |
dcd | araJ | MS1581 | MS1579 | Dcd protein; Catalyzes the deamination of dCTP to dUTP. | AraJ protein; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family. | 0.793 |
dcd | dut | MS1581 | MS1937 | Dcd protein; Catalyzes the deamination of dCTP to dUTP. | Dut protein; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.922 |
dcd | mazG | MS1581 | MS0351 | Dcd protein; Catalyzes the deamination of dCTP to dUTP. | MazG protein; Predicted pyrophosphatase. | 0.913 |
dcd | ndk | MS1581 | MS0668 | Dcd protein; Catalyzes the deamination of dCTP to dUTP. | Ndk protein; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.920 |
dcd | nrdA | MS1581 | MS0992 | Dcd protein; Catalyzes the deamination of dCTP to dUTP. | NrdA protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.549 |
dcd | nrdD | MS1581 | MS0633 | Dcd protein; Catalyzes the deamination of dCTP to dUTP. | NrdD protein; Oxygen-sensitive ribonucleoside-triphosphate reductase. | 0.902 |
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