Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cysK | gshA | MS1770 | MS1683 | CysK protein; Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | GshA protein; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine. | 0.873 |
| cysK | metC | MS1770 | MS1520 | CysK protein; Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | MetC protein; Cystathionine beta-lyases/cystathionine gamma-synthases. | 0.976 |
| cysK | pepB | MS1770 | MS0667 | CysK protein; Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | PepB protein; Probably plays an important role in intracellular peptide degradation. | 0.818 |
| cysK | pepB-2 | MS1770 | MS1550 | CysK protein; Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | PepB protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.818 |
| cysK | pepD-2 | MS1770 | MS2118 | CysK protein; Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | PepD protein; Di- and tripeptidases. | 0.802 |
| cysK | pepN | MS1770 | MS1034 | CysK protein; Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | PepN protein; Aminopeptidase N. | 0.843 |
| cysK | tyrB | MS1770 | MS1031 | CysK protein; Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | TyrB protein; Aspartate/aromatic aminotransferase. | 0.917 |
| gdhA | glnA | MS0196 | MS0262 | GdhA protein; Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | GlnA protein; Glutamine synthase. | 0.925 |
| gdhA | gshA | MS0196 | MS1683 | GdhA protein; Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | GshA protein; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine. | 0.812 |
| gdhA | tyrB | MS0196 | MS1031 | GdhA protein; Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | TyrB protein; Aspartate/aromatic aminotransferase. | 0.947 |
| glnA | gdhA | MS0262 | MS0196 | GlnA protein; Glutamine synthase. | GdhA protein; Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.925 |
| glnA | gshA | MS0262 | MS1683 | GlnA protein; Glutamine synthase. | GshA protein; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine. | 0.885 |
| gshA | cysK | MS1683 | MS1770 | GshA protein; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine. | CysK protein; Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.873 |
| gshA | gdhA | MS1683 | MS0196 | GshA protein; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine. | GdhA protein; Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.812 |
| gshA | glnA | MS1683 | MS0262 | GshA protein; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine. | GlnA protein; Glutamine synthase. | 0.885 |
| gshA | ilvE | MS1683 | MS0896 | GshA protein; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine. | IlvE protein; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.906 |
| gshA | metC | MS1683 | MS1520 | GshA protein; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine. | MetC protein; Cystathionine beta-lyases/cystathionine gamma-synthases. | 0.873 |
| gshA | pepB | MS1683 | MS0667 | GshA protein; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine. | PepB protein; Probably plays an important role in intracellular peptide degradation. | 0.901 |
| gshA | pepB-2 | MS1683 | MS1550 | GshA protein; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine. | PepB protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.901 |
| gshA | pepD-2 | MS1683 | MS2118 | GshA protein; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine. | PepD protein; Di- and tripeptidases. | 0.932 |
page 1 of 4