Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MS2083 | gst-4 | MS2083 | MS2085 | Unknown. | Gst protein; Glutathione-S-transferases; Belongs to the GST superfamily. | 0.677 |
MS2083 | lysA | MS2083 | MS2084 | Unknown. | LysA protein; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.737 |
ahp1 | gsp | MS0155 | MS0671 | AHP1 protein; Peroxiredoxin. | Gsp protein; Glutathionylspermidine synthase. | 0.900 |
ahp1 | gst-3 | MS0155 | MS1617 | AHP1 protein; Peroxiredoxin. | Gst protein; Glutathione-S-transferases; Belongs to the GST superfamily. | 0.918 |
ahp1 | gst-4 | MS0155 | MS2085 | AHP1 protein; Peroxiredoxin. | Gst protein; Glutathione-S-transferases; Belongs to the GST superfamily. | 0.918 |
ahp1 | gst-5 | MS0155 | MS2100 | AHP1 protein; Peroxiredoxin. | Gst protein; Glutathione-S-transferases. | 0.929 |
ahp1 | lpd-2 | MS0155 | MS1985 | AHP1 protein; Peroxiredoxin. | Lpd protein; Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes. | 0.958 |
gsp | ahp1 | MS0671 | MS0155 | Gsp protein; Glutathionylspermidine synthase. | AHP1 protein; Peroxiredoxin. | 0.900 |
gsp | gst-3 | MS0671 | MS1617 | Gsp protein; Glutathionylspermidine synthase. | Gst protein; Glutathione-S-transferases; Belongs to the GST superfamily. | 0.900 |
gsp | gst-4 | MS0671 | MS2085 | Gsp protein; Glutathionylspermidine synthase. | Gst protein; Glutathione-S-transferases; Belongs to the GST superfamily. | 0.900 |
gsp | gst-5 | MS0671 | MS2100 | Gsp protein; Glutathionylspermidine synthase. | Gst protein; Glutathione-S-transferases. | 0.900 |
gsp | lpd-2 | MS0671 | MS1985 | Gsp protein; Glutathionylspermidine synthase. | Lpd protein; Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes. | 0.901 |
gst-3 | ahp1 | MS1617 | MS0155 | Gst protein; Glutathione-S-transferases; Belongs to the GST superfamily. | AHP1 protein; Peroxiredoxin. | 0.918 |
gst-3 | gsp | MS1617 | MS0671 | Gst protein; Glutathione-S-transferases; Belongs to the GST superfamily. | Gsp protein; Glutathionylspermidine synthase. | 0.900 |
gst-3 | gst-4 | MS1617 | MS2085 | Gst protein; Glutathione-S-transferases; Belongs to the GST superfamily. | Gst protein; Glutathione-S-transferases; Belongs to the GST superfamily. | 0.950 |
gst-3 | gst-5 | MS1617 | MS2100 | Gst protein; Glutathione-S-transferases; Belongs to the GST superfamily. | Gst protein; Glutathione-S-transferases. | 0.913 |
gst-3 | lpd-2 | MS1617 | MS1985 | Gst protein; Glutathione-S-transferases; Belongs to the GST superfamily. | Lpd protein; Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes. | 0.907 |
gst-3 | rpoA | MS1617 | MS2023 | Gst protein; Glutathione-S-transferases; Belongs to the GST superfamily. | RpoA protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.617 |
gst-3 | rpoC | MS1617 | MS0213 | Gst protein; Glutathione-S-transferases; Belongs to the GST superfamily. | RpoC protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.554 |
gst-3 | rpoZ | MS1617 | MS1737 | Gst protein; Glutathione-S-transferases; Belongs to the GST superfamily. | RpoZ protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.501 |
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